Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment and somatic variant detection for cle purpose	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_exome_cle.cwl Branch/Commit ID: 3bebaf9b70331de9f4845e2223c55082f5a812fb
	tt_kmer_top_n.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: a33936cca222084cf68e00076255359688b6708a
	count-lines11-wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/count-lines11-wf.cwl Branch/Commit ID: 86c46cb397de029e4c91f02cca40fa2b54d22f37
	exome alignment and germline variant detection, with optitype for HLA typing	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome_hla_typing.cwl Branch/Commit ID: a670f323e77e02d9b77be9a13d73d5276dd3676c
	md5sum.cwl	https://github.com/common-workflow-language/cwl-utils.git Path: testdata/md5sum.cwl Branch/Commit ID: 124a08ce3389eb49066c34a4163cbbed210a0355
	xenbase-sra-to-fastq-se.cwl	https://github.com/datirium/workflows.git Path: subworkflows/xenbase-sra-to-fastq-se.cwl Branch/Commit ID: 9ee330737f4603e4e959ffe786fbb2046db70a00
	bam to trimmed fastqs and HISAT alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: a9133c999502acf94b433af8d39897e6c2cdf65f
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: e0fb04a0d8bc648183c6b71d099ce7aea3c3b3ff
	sum-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/sum-wf.cwl Branch/Commit ID: cd779a90a4336563dcf13795111f502372c6af83
	exome alignment and tumor-only variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome.cwl Branch/Commit ID: ae79bc51e8b502164dbe74ea3b068d6d4d36a1f8