Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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no-inputs-wf.cwl
Workflow without inputs. |
![]() Path: tests/no-inputs-wf.cwl Branch/Commit ID: 31ec48a8d81ef7c1b2c5e9c0a19e7623efe4a1e2 |
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PCA - Principal Component Analysis
Principal Component Analysis --------------- Principal component analysis (PCA) is a statistical procedure that uses an orthogonal transformation to convert a set of observations of possibly correlated variables (entities each of which takes on various numerical values) into a set of values of linearly uncorrelated variables called principal components. The calculation is done by a singular value decomposition of the (centered and possibly scaled) data matrix, not by using eigen on the covariance matrix. This is generally the preferred method for numerical accuracy. |
![]() Path: workflows/pca.cwl Branch/Commit ID: 12e5256de1b680c551c87fd5db6f3bc65428af67 |
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revsort.cwl
Reverse the lines in a document, then sort those lines. |
![]() Path: tests/wf/revsort.cwl Branch/Commit ID: cd779a90a4336563dcf13795111f502372c6af83 |
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count-lines1-wf.cwl
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![]() Path: cwltool/schemas/v1.0/v1.0/count-lines1-wf.cwl Branch/Commit ID: 4635090ef98247b1902b3c7a25c007d9db1cb883 |
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Detect Docm variants
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![]() Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 641083e9ed933d388f36fa04c00c20a810599e94 |
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Tumor-Only Detect Variants workflow
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![]() Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: f615832615c3b41728df8e47b72ef11e37e6a9e5 |
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schemadef-wf.cwl
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![]() Path: tests/schemadef-wf.cwl Branch/Commit ID: 707ebcd2173889604459c5f4ffb55173c508abb3 |
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Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs
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![]() Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: bfcb5ffbea3d00a38cc03595d41e53ea976d599d |
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scatter-wf2_v1_1.cwl
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![]() Path: testdata/scatter-wf2_v1_1.cwl Branch/Commit ID: 141048ae4b78aa765782bb752be4a1550edc2eea |
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WGS and MT analysis for fastq files
rna / protein - qc, preprocess, filter, annotation, index, abundance |
![]() Path: CWL/Workflows/wgs-noscreen-fasta.workflow.cwl Branch/Commit ID: 49e29dfc5b1f7a7630831a1052f9136caa29dbf7 |