Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Exome QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl

Branch/Commit ID: 8da2b1cd6fa379b2c22baf9dad762d39630e6f46
workflow graph scatter-wf1.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/scatter-wf1.cwl

Branch/Commit ID: 62ae25772a8e98b6591554882daa3f3758079fca
workflow graph SetArrayElementCoordinates

Transform array element coordinates into the coordinate system required by the simulation pipeline (i.e., CORSIKA system).

 https://github.com/gammasim/workflows.git

Path: workflows/SetArrayElementCoordinates.cwl

Branch/Commit ID: 789752af87eb190387ff2acb4c95c7a5cdb961e7
workflow graph Alignment without BQSR

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/sequence_to_bqsr_nonhuman.cwl

Branch/Commit ID: 8da2b1cd6fa379b2c22baf9dad762d39630e6f46
workflow graph running cellranger mkfastq and count

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl

Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622
workflow graph Bisulfite QC tools

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bisulfite_qc.cwl

Branch/Commit ID: 9c0b1497c467393e1a54735575043dced73e95c4
workflow graph SetGeomagneticField

Calculate geomagnetic field parameters for a given site and date.

 https://github.com/gammasim/workflows.git

Path: workflows/SetGeomagneticField.cwl

Branch/Commit ID: 789752af87eb190387ff2acb4c95c7a5cdb961e7
workflow graph Krona

https://github.com/EBI-Metagenomics/emg-viral-pipeline.git

Path: cwl/src/Tools/Krona/krona_swf.cwl

Branch/Commit ID: aad5474411ea31449b3e8a26eeed8920dd07fa17
workflow graph mergeAndMarkBams_4_1_3.cwl

https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git

Path: janis_pipelines/wgs_somatic/cwl/tools/mergeAndMarkBams_4_1_3.cwl

Branch/Commit ID: d1bcf010d5c39d5fc01b8862db4f258df7d4f65d
workflow graph helloworld.cwl

https://github.com/reanahub/reana-demo-helloworld.git

Path: workflow/cwl/helloworld.cwl

Branch/Commit ID: 39d64e14294db8ccf9fe0b256231d0a819f53cd4