Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Runs InterProScan on batches of sequences to retrieve functional annotations.
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https://github.com/hmenager/workflow-is-cwl.git
Path: workflows/InterProScan-v5-chunked-wf.cwl Branch/Commit ID: master |
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bam_filtering
BAM filtering |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/bam_filtering.cwl Branch/Commit ID: 1.0.9 |
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collate_unique_SSU_headers.cwl
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https://github.com/farahzkhan/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: master |
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rhapsody_pipeline_2.0.cwl#VDJ_GatherCalls.cwl
VDJ_GatherCalls collect the outputs from the multi-processed VDJ step into one file. |
https://github.com/Chi-CRL/cwl_check_workflow.git
Path: rhapsody_pipeline_2.0.cwl Branch/Commit ID: main Packed ID: VDJ_GatherCalls.cwl |
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EMG assembly for paired end Illumina
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https://github.com/proteinswebteam/ebi-metagenomics-cwl.git
Path: workflows/emg-assembly.cwl Branch/Commit ID: 9c57dba |
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Whole genome alignment and somatic variant detection
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https://github.com/apaul7/cancer-genomics-workflow.git
Path: definitions/pipelines/somatic_wgs.cwl Branch/Commit ID: low-vaf |
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wf_get_peaks_se.cwl
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https://github.com/YeoLab/eclip.git
Path: cwl/wf_get_peaks_se.cwl Branch/Commit ID: master |
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star2pass.rnaseq_harmonization.cwl
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https://github.com/NCI-GDC/gdc-rnaseq-cwl.git
Path: rnaseq-star-align/star2pass.rnaseq_harmonization.cwl Branch/Commit ID: master |
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gk-store-result.cwl
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https://github.com/vdikan/cwl-gk-thermal.git
Path: cwl/gk-store-result.cwl Branch/Commit ID: master |
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test-job-1.cwl
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https://github.com/liuweiathust/cwl_taste.git
Path: test-job-1.cwl Branch/Commit ID: master |
