Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph umi molecular alignment workflow

https://github.com/fgomez02/analysis-workflows.git

Path: definitions/subworkflows/molecular_qc.cwl

Branch/Commit ID: No_filters_detect_variants
workflow graph Varscan Workflow

https://github.com/mnneveau/cancer-genomics-workflow.git

Path: varscan/workflow.cwl

Branch/Commit ID: master
workflow graph TransDecoder 2 step workflow, running TransDecoder.LongOrfs (step 1) followed by TransDecoder.Predict (step2)

https://github.com/EBI-Metagenomics/workflow-is-cwl.git

Path: workflows/TransDecoder-v5-wf-2steps.cwl

Branch/Commit ID: master
workflow graph canine_add_rna_header_to_vcf_module.cwl

https://github.com/d3b-center/canine-dev.git

Path: subworkflows/canine_add_rna_header_to_vcf_module.cwl

Branch/Commit ID: master
workflow graph host_workflow.cwl

https://github.com/azzaea/cwl-scalability-vis.git

Path: host_workflow.cwl

Branch/Commit ID: main
workflow graph beagle-imputation-per-region.cwl

https://github.com/ddbj/imputation-server-wf.git

Path: Workflows/beagle-imputation-per-region.cwl

Branch/Commit ID: main
workflow graph Runs InterProScan on batches of sequences to retrieve functional annotations.

https://github.com/EBI-Metagenomics/workflow-is-cwl.git

Path: workflows/InterProScan-v5-chunked-wf.cwl

Branch/Commit ID: assembly
workflow graph chip-seq-alignment-bowtie.cwl

https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/ChIP-Seq/chip-seq-alignment-bowtie.cwl

Branch/Commit ID: master
workflow graph wf_trim_and_map_pe.cwl

This workflow takes in appropriate trimming params and demultiplexed reads, and performs the following steps in order: trimx1, trimx2, fastq-sort, filter repeat elements, fastq-sort, genomic mapping, sort alignment, index alignment, namesort, PCR dedup, sort alignment, index alignment

https://github.com/YeoLab/eclip.git

Path: cwl/wf_trim_and_map_pe.cwl

Branch/Commit ID: master
workflow graph wf-variantcall.cwl

https://github.com/garyluu/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-gcp/wf-variantcall.cwl

Branch/Commit ID: master