Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph rna_seq_workflow_2.cwl

https://github.com/alexiswl/novice-tutorial-exercises.git

Path: rna_seq_workflow_2.cwl

Branch/Commit ID: 252f503ce89366d06d4ceb6fd9e97cb4ab2e1321
workflow graph bam_readcount workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_readcount.cwl

Branch/Commit ID: 0d2f354af9192a56af258a7d2426c7c160f4ec1a
workflow graph rnaseq-alignment-circRNA-multiple-samples

This workflow aligns multiple samples using STAR for paired-end samples to be used in circRNA pipeline

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Alignments/star-alignment-circRNA-multiple-samples.cwl

Branch/Commit ID: 1b1cb5bbbe53a2dd5d7de7cdbff19c1bdbe23a49
workflow graph examplePipeline.cwl

https://github.com/InsightSoftwareConsortium/GetYourBrainStraight.git

Path: HCK01_2022_Virtual/Tutorials/GetYourBrainPipelined/CWL-Demo/examplePipeline.cwl

Branch/Commit ID: d6bc3672ac4047f52eb4b1695e66930d2072b4dc
workflow graph alignment workflow

https://github.com/griffithlab/pmbio.org.git

Path: assets/CWL/workflow.cwl

Branch/Commit ID: 1fe1f526a10bb2f363dcc7b36d7ce6fa8031b68e
workflow graph Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass1.cwl

Branch/Commit ID: c009eeba7379efbbd37b8d5013a83f161f06939b
workflow graph scatter-wf1.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/scatter-wf1.cwl

Branch/Commit ID: 368b562a1449e8cd39ae8b7f05926b2bfb9b22df
workflow graph cond-wf-001.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/conditionals/cond-wf-001.cwl

Branch/Commit ID: 57baec040c99d7edef8242ef51b5470b1c82d733
workflow graph steplevel-resreq.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/steplevel-resreq.cwl

Branch/Commit ID: 57baec040c99d7edef8242ef51b5470b1c82d733
workflow graph Run tRNAScan

https://github.com/ncbi/pgap.git

Path: bacterial_trna/wf_trnascan.cwl

Branch/Commit ID: c009eeba7379efbbd37b8d5013a83f161f06939b