Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph contamination_cleanup

This workflow detect and remove contamination from a DNA fasta file

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Contamination/contamination-cleanup.cwl

Branch/Commit ID: 1b1cb5bbbe53a2dd5d7de7cdbff19c1bdbe23a49
workflow graph workflow.cwl

https://github.com/Andreja28/cloud-workflows.git

Path: cwl/baghdadite/deconv/workflow.cwl

Branch/Commit ID: ed5dd0589aa951193f4b98f44b0edc7f58e04ba5
workflow graph create_snap_and_analyze.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: create_snap_and_analyze.cwl

Branch/Commit ID: 4b2af54638bc471ee3e14e5f49546a2b6860804e
workflow graph blast2tree_v2.cwl

blastp, awk, blastdbcmd, clustalo, and fasttreeの5つのステップを実行

 https://github.com/yonesora56/togotv_cwl_for_remote_container.git

Path: zatsu_cwl_bioinformatics/blast2tree_v2.cwl

Branch/Commit ID: 4aa7ab4e4f8eed6b676ea04c53afd3fe57d2ca7b
workflow graph GATKBaseRecalBQSRWorkflow_4_1_3.cwl

https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git

Path: janis_pipelines/wgs_somatic/cwl/tools/GATKBaseRecalBQSRWorkflow_4_1_3.cwl

Branch/Commit ID: d1bcf010d5c39d5fc01b8862db4f258df7d4f65d
workflow graph Tumor-Only Detect Variants workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/tumor_only_detect_variants.cwl

Branch/Commit ID: 641083e9ed933d388f36fa04c00c20a810599e94
workflow graph revsort.cwl

https://github.com/ResearchObject/runcrate.git

Path: cwl/revsortlcase/revsort.cwl

Branch/Commit ID: 33d769ba3b1086f33351f76f8db4ad841c53a69b
workflow graph Exome QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl

Branch/Commit ID: 889a077a20c0fdb01f4ed97aa4bc40f920c37a1a
workflow graph Detect Variants workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/detect_variants_mouse.cwl

Branch/Commit ID: 2e298960837739717ec2928a99c5d811183012e6
workflow graph tt_blastn_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_blastn_wnode.cwl

Branch/Commit ID: c009eeba7379efbbd37b8d5013a83f161f06939b