Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	samtools_sort	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/samtools_sort.cwl Branch/Commit ID: 637e294ff72687314faacef2c30cb46874611e50
	exome alignment and tumor-only variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome.cwl Branch/Commit ID: ae75b938e6e8ae777a55686bbacad824b3c6788c
	env-wf2.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/env-wf2.cwl Branch/Commit ID: 6003cbb94f16103241b562f2133e7c4acac6c621
	rnaseq-se.cwl Runs RNA-Seq BioWardrobe basic analysis with single-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/rnaseq-se.cwl Branch/Commit ID: 812b0ff40dda18ab7a9a872ff13a577be8531ba6
	bam to trimmed fastqs and HISAT alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 869b331cfeb9dbd5907498e3eccdebc7c28283e5
	mut3.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/mut3.cwl Branch/Commit ID: cd1ba3df3745fba4b635f05c67ebeaf3b8a9f4ec
	steplevel-resreq.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/steplevel-resreq.cwl Branch/Commit ID: 6003cbb94f16103241b562f2133e7c4acac6c621
	group-isoforms-batch.cwl Workflow runs group-isoforms.cwl tool using scatter for isoforms_file input. genes_filename and common_tss_filename inputs are ignored.	https://github.com/datirium/workflows.git Path: tools/group-isoforms-batch.cwl Branch/Commit ID: 42dc4f70b117e78785b82865ec4c4b941ac1c259
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: e4d6182d5f7a6a880e5f2b21273cf40d25e187df
	align_sort_sa	https://github.com/ncbi/pgap.git Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 7e875f77b615b4f7ebfb23a1da30eb216cc52919