Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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varscan somatic workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: 0b0ad1a54f0f6849dc645449b079470448a23095 |
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bgzip and index VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 0b0ad1a54f0f6849dc645449b079470448a23095 |
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transform.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/validate/transform.cwl Branch/Commit ID: 17823fcd036d134df803fbf76e23b0bc5eabedfd |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: e2a34d2b8c406db9aed8e49e8bdcf36f51444379 |
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count-lines1-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines1-wf.cwl Branch/Commit ID: 9e7c68c0834645ba53a7e2b5f70d53df9d051c92 |
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Unaligned to aligned BAM
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align.cwl Branch/Commit ID: a9133c999502acf94b433af8d39897e6c2cdf65f |
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Per-region pindel
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 24e5290aec441665c6976ee3ee8ae3574c49c6b5 |
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Prepare user input
Prepare user input for NCBI-PGAP pipeline |
https://github.com/ncbi/pgap.git
Path: prepare_user_input2.cwl Branch/Commit ID: ef266744578e2dcbce57c110c6fa3b9eee91e316 |
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HS Metrics workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/hs_metrics.cwl Branch/Commit ID: 869b331cfeb9dbd5907498e3eccdebc7c28283e5 |
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Per-region pindel
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 0b0ad1a54f0f6849dc645449b079470448a23095 |
