Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 3034168d652bfa930ba09af20e473a4564a8010d
	tt_kmer_compare_wnode Pairwise comparison	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: 122aba2dafbb63241413c82b725b877c04523aaf
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: c17cac4c046f8ba2b8574a121c44a72d2e6b27e6
	basic_sep.cwl	https://github.com/common-workflow-lab/wdl-cwl-translator.git Path: wdl2cwl/tests/cwl_files/basic_sep.cwl Branch/Commit ID: 81d4bdaecebaa843903b40834cb15e350aa047e8
	count-lines11-null-step-wf-noET.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/count-lines11-null-step-wf-noET.cwl Branch/Commit ID: e515226f8ac0f7985cd94dae4a301150adae3050
	FASTQ Download FASTQ Download Downloads FASTQ files from the provided SRR identifiers	https://github.com/datirium/workflows.git Path: workflows/fastq-download.cwl Branch/Commit ID: 22880e0f41d0420a17d643e8a6e8ee18165bbfbf
	maf2vcf_gz_workflow.cwl Workflow to convert a maf file into a vcf.gz with .tbi index	https://github.com/mskcc/pluto-cwl.git Path: cwl/maf2vcf_gz_workflow.cwl Branch/Commit ID: 7eb2b0a4d37018142233d770595ac2e00376dab4
	revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/revsort.cwl Branch/Commit ID: a8d8d00fd1e4274e1bc16001937db5aae46b0b0d
	phase VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: c6bbd4cdd612b3b5cc6e9000df4800c21e192bf5
	count-lines3-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines3-wf.cwl Branch/Commit ID: e8b3565a008d95859fc44227987a54e6a53a8c29