Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Unaligned BAM to BQSR and VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: 5cb188131f786ed33156e2f0e3dd63ab9c04245d
	scatter GATK HaplotypeCaller over intervals	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 5cb188131f786ed33156e2f0e3dd63ab9c04245d
	WGS QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: 5cb188131f786ed33156e2f0e3dd63ab9c04245d
	process VCF workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: e2a34d2b8c406db9aed8e49e8bdcf36f51444379
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: e2a34d2b8c406db9aed8e49e8bdcf36f51444379
	fp_filter workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: e2a34d2b8c406db9aed8e49e8bdcf36f51444379
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: ef266744578e2dcbce57c110c6fa3b9eee91e316
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: 9a657bc8c462542dc7f57fba9e04dc1669f966ba
	trnascan_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: ef266744578e2dcbce57c110c6fa3b9eee91e316
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: a23f42ef49c10a588fd35a3afaad5de03e253533