Explore Workflows

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl

Branch/Commit ID: 9a657bc8c462542dc7f57fba9e04dc1669f966ba

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/env-wf2.cwl

Branch/Commit ID: cd779a90a4336563dcf13795111f502372c6af83

Workflow runs [Bowtie](http://bowtie-bio.sourceforge.net/tutorial.shtml) v1.2.0 (12/30/2016) to build indices for reference genome provided in a single FASTA file as fasta_file input. Generated indices are saved in a folder with the name that corresponds to the input genome

https://github.com/datirium/workflows.git

Path: workflows/bowtie-index.cwl

Branch/Commit ID: ddc35c559d1ac6aab4972fe1a2b63300c4373f54

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines2-wf.cwl

Branch/Commit ID: 6300a49ec29be956ab451311fe9781522f461aee

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan_germline.cwl

Branch/Commit ID: 869b331cfeb9dbd5907498e3eccdebc7c28283e5

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/scatter-wf1.cwl

Branch/Commit ID: a062055fddcc7d7d9dbc53d28288e3ccb9a800d8

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/basename-fields-test.cwl

Branch/Commit ID: 0184e647cde1bc44279107d6df31b3ebb138769c

https://github.com/kids-first/kf-alignment-workflow.git

Path: dev/ultra-opt/kfdrc_bwamem_subwf.cwl

Branch/Commit ID: 447af574ee9985d205e08d9cc9c182246802095d

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl

Branch/Commit ID: 40097e1ed094c5b42b68f3db2ff2cbe78c182479

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/conflict-wf.cwl

Branch/Commit ID: a062055fddcc7d7d9dbc53d28288e3ccb9a800d8

Packed ID: collision