Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	pindel parallel workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: 641083e9ed933d388f36fa04c00c20a810599e94
	Set Operations for Called Peaks (ChIP/ATAC/C&R/diffbind) # Set Operations for Peaks This workflow takes as input multiple peak list TSV files (the `iaintersect_result.tsv` output under the \"Files\" output tab) from the ChIP, ATAC, C&R, or diffbind workflows and performs the user-selected set operation on the group. Set operations include intersection, union, difference, and complement. See the tooltip for the `set_operator` input for more details.	https://github.com/datirium/workflows.git Path: workflows/filter-peaks-by-overlap.cwl Branch/Commit ID: 93b844a80f4008cc973ea9b5efedaff32a343895
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: 5cb188131f786ed33156e2f0e3dd63ab9c04245d
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 205f4ceb47ba7537a6923d2dfb03668317c2fd89
	wgs alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: 3034168d652bfa930ba09af20e473a4564a8010d
	sum-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/sum-wf.cwl Branch/Commit ID: 3ed10d0ea7ac57550433a89a92bdbe756bdb0e40
	sec-wf-out.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/sec-wf-out.cwl Branch/Commit ID: aec33fcfa3459a90cbba8c88ebb991be94d21429
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 6b365b79675b2aabfb8d5829bb8df0a6e986b037
	scatter-wf4.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/scatter-wf4.cwl Branch/Commit ID: 63f539ba60e91f0cb3ce7cda2c5da5c65525c375 Packed ID: main
	echo-wf-default.cwl	https://github.com/common-workflow-language/cwl-v1.2.git Path: tests/echo-wf-default.cwl Branch/Commit ID: 31ec48a8d81ef7c1b2c5e9c0a19e7623efe4a1e2