Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Running cellranger count and lineage inference	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_cell_rnaseq.cwl Branch/Commit ID: 049f4aeff4c4a1b8421cac9b1c1c1f0da5848315
	kmer_cache_retrieve	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 0d0ba0c3410e8aee55c82f077cee31d8ee929b5a
	rna amplicon analysis for fasta files RNAs - qc, preprocess, annotation, index, abundance	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/amplicon-fasta.workflow.cwl Branch/Commit ID: 6a8727124baf77416ca797982fd4e0689c2a593a
	HBA_target.cwl	https://git.astron.nl/eosc/prefactor3-cwl.git Path: workflows/HBA_target.cwl Branch/Commit ID: cc03d87fe6d51216a74f38c6ba0b9dffb8e6ee81
	canine_vcfmerger2_module.cwl	https://github.com/d3b-center/canine-dev.git Path: subworkflows/canine_vcfmerger2_module.cwl Branch/Commit ID: 462aaebbd442e84ea101b45b716df0174b88512e
	Bisulfite alignment and QC	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 6b365b79675b2aabfb8d5829bb8df0a6e986b037
	ani_top_n	https://github.com/ncbi/pgap.git Path: task_types/tt_ani_top_n.cwl Branch/Commit ID: cd97086739ae5988bab09b05e9259675c4b6bce6
	Prepare user input Prepare user input for NCBI-PGAP pipeline	https://github.com/ncbi/pgap.git Path: prepare_user_input2.cwl Branch/Commit ID: 61eaea2f746c8a1fc2a2b731056b068e28ca4e20
	trim-rnaseq-pe.cwl Runs RNA-Seq BioWardrobe basic analysis with pair-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-rnaseq-pe.cwl Branch/Commit ID: b8e28a017f7b1a2900ec0fd3b3549f123f0c91b4
	Vcf concordance evaluation workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/vcf_eval_concordance.cwl Branch/Commit ID: fbeea265295ae596d5a3ba563e766be0c4fc26e8