Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph lobSTR-workflow.cwl

https://github.com/common-workflow-library/legacy.git

Path: workflows/lobSTR/lobSTR-workflow.cwl

Branch/Commit ID: lobstr-v1
workflow graph Bisulfite alignment and QC

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/bisulfite.cwl

Branch/Commit ID: master
workflow graph if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/toolkit/if_input_is_bz2_generate_md5sum_else_return_input_chksum_json.cwl

Branch/Commit ID: 0.4.0
workflow graph exomeseq-03-organizedirectories.cwl

https://github.com/Duke-GCB/bespin-cwl.git

Path: subworkflows/exomeseq-03-organizedirectories.cwl

Branch/Commit ID: gatk4-fixes
workflow graph fastqSE2bam.multisamples.cwl

https://github.com/ddbj/human-reseq.git

Path: Workflows/fastqSE2bam.multisamples.cwl

Branch/Commit ID: master
workflow graph sc_atac_seq_prep_process_init.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/sc_atac_seq_prep_process_init.cwl

Branch/Commit ID: 06aeffe
workflow graph preprocess_vcf.cwl

This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow.

https://github.com/icgc-tcga-pancancer/oxog-dockstore-tools.git

Path: preprocess_vcf.cwl

Branch/Commit ID: 1.0.0
workflow graph WGS processing workflow for single sample

https://github.com/arvados/arvados-tutorial.git

Path: WGS-processing/cwl/helper/bwamem-gatk-report-wf.cwl

Branch/Commit ID: main
workflow graph wgsp_alignment_fq_wf.cwl

https://github.com/cr-ste-justine/chujs-alignment-workflow.git

Path: workflows/wgsp_alignment_fq_wf.cwl

Branch/Commit ID: dev
workflow graph conflict-wf.cwl#collision

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/conflict-wf.cwl

Branch/Commit ID: main

Packed ID: collision