Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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align_merge_sas
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: af468ae34c82dc88399aeedfd8f12f1e87052367 |
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bam to trimmed fastqs and HISAT alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 040a3d1a719736d7fce6db83702d3fb7f9d69eac |
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scatter-valuefrom-wf5.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf5.cwl Branch/Commit ID: 49cd284a8fc7884de763573075d3e1d6a4c1ffdd |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 5c49c5a53259d4c88a02750f1a16a3c02d711115 |
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Detect DoCM variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 5c49c5a53259d4c88a02750f1a16a3c02d711115 |
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alignment for nonhuman with qc
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/alignment_wgs_nonhuman.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0 |
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phase VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 93656ed6582073e434eab168c610625a835dce37 |
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alignment_prep.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/alignment_prep.cwl Branch/Commit ID: 91e222adeeee0bd567a5bf2385400610fad0d3a9 |
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cond-wf-009.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/conditionals/cond-wf-009.cwl Branch/Commit ID: 31ec48a8d81ef7c1b2c5e9c0a19e7623efe4a1e2 |
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tt_fscr_calls_pass1
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https://github.com/ncbi/pgap.git
Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: cc7fb3e5c534036638921878527a610fd5e1c2ab |
