Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	default-wf5.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/default-wf5.cwl Branch/Commit ID: 83038feb2a6fc3bab952e1ecc2a11bfbc8c557b4
	downsample unaligned BAM and align	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: 9a657bc8c462542dc7f57fba9e04dc1669f966ba
	bwa_mem	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/bwa_mem.cwl Branch/Commit ID: 86f2f3fb64e916607637d93cf6715bab90b1f1d3
	tt_univec_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_univec_wnode.cwl Branch/Commit ID: 3bec7182e39cb4af10ed8920639adfa78a28ed81
	exome alignment with qc	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/alignment_exome.cwl Branch/Commit ID: 3bebaf9b70331de9f4845e2223c55082f5a812fb
	Detect Variants workflow for nonhuman WGS pipeline	https://github.com/apaul7/cancer-genomics-workflow.git Path: definitions/pipelines/detect_variants_wgs_nonhuman.cwl Branch/Commit ID: bfcb5ffbea3d00a38cc03595d41e53ea976d599d
	rnaseq-pe.cwl Runs RNA-Seq BioWardrobe basic analysis with pair-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/rnaseq-pe.cwl Branch/Commit ID: 801f7b363e0599b9a28ecda696dfdb1c0e40ce71
	FASTQ to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/fastq_to_bqsr.cwl Branch/Commit ID: 049f4aeff4c4a1b8421cac9b1c1c1f0da5848315
	cnv_gridss CNV GRIDSS calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/cnv_gridss.cwl Branch/Commit ID: 86f2f3fb64e916607637d93cf6715bab90b1f1d3
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl Branch/Commit ID: 3bebaf9b70331de9f4845e2223c55082f5a812fb