Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	rnaseq-pe.cwl Runs RNA-Seq BioWardrobe basic analysis with pair-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/rnaseq-pe.cwl Branch/Commit ID: 64e85970dbecba89c3380ab285c108d221e76fe6
	Bisulfite QC tools	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bisulfite_qc.cwl Branch/Commit ID: 31a179d7a2f2ac86bfd7fcc4dc79832c3739ae76
	running cellranger mkfastq and count	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 051074fce4afd9732ef34db9dd43d3a1d8e979d6
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 0bc1c33a2293e054ad00974971edc79c13252cc7
	env-wf2.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/env-wf2.cwl Branch/Commit ID: b82ce7ae901a54c7a062fd5eefd8d5ceb5a4d684
	Tumor-Only Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: f9600f9959acdc30259ba7e64de61104c9b01f0b
	Hello World Outputs a message using echo	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/hello-workflow.cwl Branch/Commit ID: 49cd284a8fc7884de763573075d3e1d6a4c1ffdd
	trim-chipseq-se.cwl Runs ChIP-Seq BioWardrobe basic analysis with single-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-chipseq-se.cwl Branch/Commit ID: 80d64741638b14de5cf58236b6d6d99713c62086
	downsample unaligned BAM and align	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: c711498c04d6b8ddf92ddceb6219f074765f7993
	stdout-wf_v1_2.cwl	https://github.com/common-workflow-language/cwl-utils.git Path: testdata/stdout-wf_v1_2.cwl Branch/Commit ID: 0ab1d42d10f7311bb4032956c4a6f3d2730d9507