Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	tt_blastn_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_blastn_wnode.cwl Branch/Commit ID: 5b498b4c4f17bb8f17e6886aa4c5661d7aba34fc
	taxcheck.cwl Perform taxonomic identification tasks on an input genome	https://github.com/ncbi/pgap.git Path: taxcheck.cwl Branch/Commit ID: 4ffbad9ffeab15ec8af5f6f91bd352ef96d1ef77
	bgzip and index VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: efbbe5ed51f6ac583e87a348785c72818a33f56e
	Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_bacterial_annot_pass3.cwl Branch/Commit ID: 1cfd46014be8d867044cb10d1ddde0cb3068ee84
	env-wf1.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/env-wf1.cwl Branch/Commit ID: 3e90671b25f7840ef2926ad2bacbf447772dda94
	nestedworkflows.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/examples/nestedworkflows.cwl Branch/Commit ID: 735d50b3d97f2f30463c38085fc61cfd4b39a8b5
	count-lines6-wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/count-lines6-wf.cwl Branch/Commit ID: 3e90671b25f7840ef2926ad2bacbf447772dda94
	nanopore_bcr_abl_umi_analysis.cwl	https://github.com/teoloup/nanopore_fusion.git Path: nanopore_bcr_abl_umi_analysis.cwl Branch/Commit ID: dd1762e543821c28151e1a00241bf94390b053f0
	schemadef-wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/schemadef-wf.cwl Branch/Commit ID: 3e90671b25f7840ef2926ad2bacbf447772dda94
	sequence (bam or fastqs) to trimmed fastqs and HISAT alignments	https://github.com/apaul7/cancer-genomics-workflow.git Path: definitions/subworkflows/sequence_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: bfcb5ffbea3d00a38cc03595d41e53ea976d599d