Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	wgs alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: 44ada20f3eeb59005d5bd999d2435102e9bae991
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: 2f65fc96207a71b1cda4e246f808bed056608cd0
	ST520101.cwl	https://github.com/Marco-Salvi/dtc51.git Path: ST520101.cwl Branch/Commit ID: 4bdf3599d3d5ab0b30af11b1b3a5ebbf33af5259
	align_sort_sa	https://github.com/ncbi/pgap.git Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 61e3752f1f5e2ee498fa024c235226f8580be942
	kmer_build_tree	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_build_tree.cwl Branch/Commit ID: 3e7a3c1cc1ed5164ae0a51a96f20d7c480d1d70b
	blastp_wnode_naming	https://github.com/ncbi/pgap.git Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 76a9637a06e2102645eae29aff10b6f7185892a5
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139
	process VCF workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_process_vcf.cwl Branch/Commit ID: 60edaf6f57eaaf02cda1a3d8cb9a825aa64a43e2
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_vcf_mouse.cwl Branch/Commit ID: a9133c999502acf94b433af8d39897e6c2cdf65f
	Workflow to run pVACseq from detect_variants and rnaseq pipeline outputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pvacseq.cwl Branch/Commit ID: 60edaf6f57eaaf02cda1a3d8cb9a825aa64a43e2