Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph 811.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/811.cwl

Branch/Commit ID: 51516cfa746ab7124c9a512109e53406ea42abcd
workflow graph metabarcode (gene amplicon) analysis for fastq files

protein - qc, preprocess, annotation, index, abundance

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/metabarcode-fasta.workflow.cwl

Branch/Commit ID: 963ca6a73a9f8879d57c08fa59548f98f28e755a
workflow graph HelloWorld-pipeline-020.cwl#hello_pipeline

https://github.com/ILIAD-ocean-twin/application_package.git

Path: HelloWorld/files/HelloWorld-pipeline-020.cwl

Branch/Commit ID: aab1b560c6a855c645f43635f155a15800a7ce0d

Packed ID: hello_pipeline
workflow graph structural-variants-pair.cwl

https://github.com/mskcc/argos-cwl.git

Path: modules/pair/structural-variants-pair.cwl

Branch/Commit ID: baf246fab1e6d2e6c628377d9c443edbbe4f7838
workflow graph js_output_workflow.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/js_output_workflow.cwl

Branch/Commit ID: 51516cfa746ab7124c9a512109e53406ea42abcd
workflow graph protein_extract

https://github.com/ncbi/pgap.git

Path: progs/protein_extract.cwl

Branch/Commit ID: c64599f5db2437f9323d41cc3d8d9efb20a2667e
workflow graph Seed Search Compartments

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_seed.cwl

Branch/Commit ID: c64599f5db2437f9323d41cc3d8d9efb20a2667e
workflow graph Tumor-Only Detect Variants workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/tumor_only_detect_variants.cwl

Branch/Commit ID: a59a803e1809a8fbfabca6b8962a8ad66dd01f1d
workflow graph Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass3.cwl

Branch/Commit ID: 807fe40bca1fbd18ede6250851b9f71de98da69b
workflow graph Subworkflow to allow calling cnvkit with cram instead of bam files

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_cnvkit.cwl

Branch/Commit ID: 18600518ce6539a2e29c1707392a4c5da5687fa3