Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph collate_unique_rRNA_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_rRNA_headers.cwl

Branch/Commit ID: ef3c7b2
workflow graph harmonization_bwa_mem.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/harmonization_bwa_mem.cwl

Branch/Commit ID: master
workflow graph standard_pipeline.cwl

This is a workflow to go from UMI-tagged fastqs to standard bams. It does not include collapsing, or QC It does include modules 1 and 2

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/standard_pipeline.cwl

Branch/Commit ID: master
workflow graph test-main.cwl

https://github.com/kyusque/abmp_log_dump2pieda.git

Path: test-main.cwl

Branch/Commit ID: master
workflow graph scatter-valuefrom-wf3.cwl#main

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/scatter-valuefrom-wf3.cwl

Branch/Commit ID: main

Packed ID: main
workflow graph multiple_input_feature_requirement.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/multiple_input_feature_requirement.cwl

Branch/Commit ID: main
workflow graph SSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/SSU-from-tablehits.cwl

Branch/Commit ID: 56dafa4
workflow graph wes_alignment.cwl

https://github.com/sylviaJian/test_pipelines.git

Path: wes_alignment.cwl

Branch/Commit ID: main
workflow graph rnaseq_metrics_workflow.cwl

https://github.com/NCI-GDC/gdc-rnaseq-cwl.git

Path: rnaseq-star-align/subworkflows/rnaseq_processing/rnaseq_metrics_workflow.cwl

Branch/Commit ID: master
workflow graph gaps_or_not.cwl

https://github.com/nal-i5k/organism_onboarding.git

Path: gaps_or_not.cwl

Branch/Commit ID: master