Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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minibam_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/icgc-tcga-pancancer/pcawg-minibam.git
Path: minibam_sub_wf.cwl Branch/Commit ID: 1.0.0 |
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qiime2 diversity analyses
Alpha and beta diversity analysis from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/ |
https://github.com/Duke-GCB/bespin-cwl.git
Path: packed/qiime2-step3-alpha-analysis.cwl Branch/Commit ID: qiime2-workflow-paired Packed ID: qiime2-06-alpha-beta-diversity.cwl |
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waltz_workflow_all_bams.cwl
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https://github.com/andurill/ACCESS-Pipeline.git
Path: workflows/waltz/waltz_workflow_all_bams.cwl Branch/Commit ID: master |
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per_cluster_workflow.cwl
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https://github.com/mr-c/scalability-reproducibility-chapter.git
Path: CWL/per_cluster_workflow.cwl Branch/Commit ID: CWL |
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03-map-pe.cwl
STARR-seq 03 mapping - reads: PE |
https://github.com/alexbarrera/GGR-cwl.git
Path: v1.0/STARR-seq_pipeline/03-map-pe.cwl Branch/Commit ID: master |
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bams2gvcf.woBQSR.multisamples.cwl
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https://github.com/ddbj/human-reseq.git
Path: Workflows/bams2gvcf.woBQSR.multisamples.cwl Branch/Commit ID: master |
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scRNA-seq pipeline using Salmon and Alevin
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: pipeline.cwl Branch/Commit ID: 9225fa2 |
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predict-workflow.cwl
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https://github.com/johnbradley/iMADS-worker.git
Path: predict_service/predict-workflow.cwl Branch/Commit ID: master |
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tRNA_selection.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: fa86fce |
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bam_filtering
BAM filtering |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/bam_filtering.cwl Branch/Commit ID: master |
