Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph bam to trimmed fastqs

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl

Branch/Commit ID: downsample_and_recall
workflow graph hecil.cwl

https://github.com/Alves-Bruno/hecil-graph.git

Path: hecil.cwl

Branch/Commit ID: master
workflow graph genome-kallisto-index.cwl

Generates a FASTA file with the DNA sequences for all transcripts in a GFF file and builds kallisto index

https://github.com/Barski-lab/workflows.git

Path: tools/genome-kallisto-index.cwl

Branch/Commit ID: master
workflow graph metaphlan_wfl.cwl

https://github.com/stevetsa/metaphlan-sbcgc.git

Path: metaphlan_wfl.cwl

Branch/Commit ID: master
workflow graph Detect whitelisted variants

https://github.com/ChrisMaherLab/PACT.git

Path: subworkflows/whitelist.cwl

Branch/Commit ID: master
workflow graph optional_src_mandatory_sink.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/optional_src_mandatory_sink.cwl

Branch/Commit ID: main
workflow graph Varscan Workflow

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: varscan/workflow.cwl

Branch/Commit ID: master
workflow graph umi per-lane alignment subworkflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/umi_alignment.cwl

Branch/Commit ID: master
workflow graph wf.cwl#VDJ_GatherCalls.cwl

VDJ_GatherCalls collect the outputs from the multi-processed VDJ step into one file.

https://github.com/aheinzel/tmp_rhapsody_for_cwl_vis.git

Path: wf.cwl

Branch/Commit ID: main

Packed ID: VDJ_GatherCalls.cwl
workflow graph myWorkflow2.cwl

https://github.com/pascmont/cwltest.git

Path: myWorkflow2.cwl

Branch/Commit ID: main