Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph make_search_pair_workflow.cwl

https://github.com/pvanheus/lukasa.git

Path: make_search_pair_workflow.cwl

Branch/Commit ID: main
workflow graph Creates FASTA file from BED coordinates

This workflow creates FASTA file from BED coordinates

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/File-formats/fasta-from-bed.cwl

Branch/Commit ID: master
workflow graph tRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: 71d9c83
workflow graph CNA Pipeline

https://github.com/ChrisMaherLab/PACT.git

Path: pipelines/cna_pipeline.cwl

Branch/Commit ID: master
workflow graph exomeseq-gatk4-02-variantdiscovery.cwl

https://github.com/Duke-GCB/bespin-cwl.git

Path: subworkflows/exomeseq-gatk4-02-variantdiscovery.cwl

Branch/Commit ID: gatk4-fixes
workflow graph EMG pipeline v3.0 (single end version)

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3.cwl

Branch/Commit ID: 5833078
workflow graph rRNA_selection.cwl

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: 43d2fb8
workflow graph cmsearch-multimodel.cwl

https://github.com/farahzkhan/ebi-metagenomics-cwl.git

Path: workflows/cmsearch-multimodel.cwl

Branch/Commit ID: master
workflow graph contamination_foreign_chromosome

This workflow detect and remove foreign chromosome from a DNA fasta file

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Contamination/contamination-foreign-chromosome-blastn.cwl

Branch/Commit ID: master
workflow graph extract other ncrnas!

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/subworkflows/other_ncrnas.cwl

Branch/Commit ID: master