Explore Workflows
View already parsed workflows here or click here to add your own
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module-3.cwl
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Path: workflows/module-3.cwl Branch/Commit ID: master |
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heatmap-prepare.cwl
Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order. |
Path: tools/heatmap-prepare.cwl Branch/Commit ID: license_test |
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collect_pair_files.cwl
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Path: modules/pair/collect_pair_files.cwl Branch/Commit ID: master |
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wf.cwl#SplitAndSubsample.cwl
SplitAndSubsample splits, subsamples and formats read files to be deposited in QualityFilter. |
Path: wf.cwl Branch/Commit ID: main Packed ID: SplitAndSubsample.cwl |
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cond-wf-011.cwl
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Path: tests/conditionals/cond-wf-011.cwl Branch/Commit ID: main |
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functional analysis prediction with InterProScan
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Path: workflows/functional_analysis.cwl Branch/Commit ID: 56dafa4 |
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create_snap_and_analyze.cwl
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Path: create_snap_and_analyze.cwl Branch/Commit ID: bb023f9 |
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Alignment without BQSR
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Path: definitions/subworkflows/sequence_to_bqsr_nonhuman.cwl Branch/Commit ID: master |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
Path: workflows/rna-selector.cwl Branch/Commit ID: 56dafa4 |
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broad-best-practice-data-pre-processing-workflow-4-1-0-0_decomposed.cwl
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Path: broad-best-practice-data-pre-processing-workflow-4-1-0-0_decomposed.cwl Branch/Commit ID: master |
