Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph map medium and long reads (> 100 bp) against reference genome

https://github.com/common-workflow-library/bio-cwl-tools.git

Path: bwa/BWA-Mem2-single.cwl

Branch/Commit ID: release
workflow graph collate_unique_SSU_headers.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/collate_unique_SSU_headers.cwl

Branch/Commit ID: 1b0851e
workflow graph md5sum.cwl

https://github.com/dockstore-testing/dockstore-workflow-md5sum-unified.git

Path: md5sum/md5sum.cwl

Branch/Commit ID: develop
workflow graph binning.cwl

https://github.com/EBI-Metagenomics/CWL-binning.git

Path: workflows/binning.cwl

Branch/Commit ID: master
workflow graph wrapper.cwl

https://gitlab.com/ellip-ogc-eo-apps/cwl.git

Path: fan-out/stage-in/wrapper.cwl

Branch/Commit ID: master
workflow graph RNASelector as a CWL workflow

https://doi.org/10.1007/s12275-011-1213-z

 https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: 8515542
workflow graph scatter-wf4.cwl#main

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/scatter-wf4.cwl

Branch/Commit ID: main

Packed ID: main
workflow graph wgs alignment and tumor-only variant detection

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/tumor_only_wgs.cwl

Branch/Commit ID: downsample_and_recall
workflow graph dfast-filelist.cwl

https://github.com/nigyta/bact_genome.git

Path: cwl/workflow/dfast-filelist.cwl

Branch/Commit ID: master
workflow graph rnaseq_pipeline_fastq.cwl

https://github.com/FarahZKhan/cwl_workflows.git

Path: topmed-workflows/TOPMed_RNAseq_pipeline/rnaseq_pipeline_fastq.cwl

Branch/Commit ID: master