Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph ChIP-exo peak caller workflow for single-end samples with no P-Value inflection

This workflow execute peak caller and QC from ChIP-exo for single-end samples with no P-Value inflection

 https://gitlab.com/r78v10a07/cwl-workflow.git

Path: workflows/ChIP-exo/peak_caller-SE-no_inflection.cwl

Branch/Commit ID: master
workflow graph varscan somatic workflow

https://github.com/mnneveau/cancer-genomics-workflow.git

Path: varscan/varscan.cwl

Branch/Commit ID: master
workflow graph NonSpliced RNAseq workflow

Workflow for NonSpliced RNAseq data alignment with multiple aligners. Steps: - workflow_illumina_quality.cwl: - FastQC (control) - fastp (trimming) - bowtie2 (read mapping) - sam_to_sorted-bam - featurecounts (transcript read counts) - kallisto (transcript [pseudo]counts)

https://git.wageningenur.nl/unlock/cwl.git

Path: cwl/workflows/workflow_RNAseq_NonSpliced.cwl

Branch/Commit ID: master
workflow graph try_wf1.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/manual_paleocar_cwl_model/try_wf1.cwl

Branch/Commit ID: master
workflow graph pipeline.cwl

https://github.com/hubmapconsortium/pan-organ-azimuth-annotate.git

Path: pipeline.cwl

Branch/Commit ID: 7113217
workflow graph count-lines4-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines4-wf.cwl

Branch/Commit ID: master
workflow graph rnaseq_pipeline_fastq_checker-tar.cwl

https://github.com/heliumdatacommons/TOPMed_RNAseq_CWL.git

Path: workflow/checker-workflows/rnaseq_pipeline_fastq_checker-tar.cwl

Branch/Commit ID: master
workflow graph GATK-Sub-Workflow-h3abionet-snp.cwl

https://github.com/h3abionet/h3agatk.git

Path: workflows/GATK/GATK-Sub-Workflow-h3abionet-snp.cwl

Branch/Commit ID: master
workflow graph pindel parallel workflow

https://github.com/hamid58b/cancer-genomics-workflow.git

Path: pindel/workflow.cwl

Branch/Commit ID: master
workflow graph cmsearch-multimodel.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/cmsearch-multimodel.cwl

Branch/Commit ID: d3b8e45