Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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Single-Cell Preprocessing Pipeline
Devel version of Single-Cell Preprocessing Pipeline =================================================== |
![]() Path: workflows/single-cell-preprocess.cwl Branch/Commit ID: cbefc215d8286447620664fb47076ba5d81aa47f |
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allele-process-reference.cwl
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![]() Path: subworkflows/allele-process-reference.cwl Branch/Commit ID: e9a24699d8b5ffe64412b1ba0af8448c281b223a |
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scatter-wf3_v1_2.cwl#main
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![]() Path: testdata/scatter-wf3_v1_2.cwl Branch/Commit ID: 77669d4dd1d1ebd2bdd9810f911608146d9b8e51 Packed ID: main |
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js-expr-req-wf.cwl#wf
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![]() Path: cwltool/schemas/v1.0/v1.0/js-expr-req-wf.cwl Branch/Commit ID: 0b3846fbf866584870a0b1ce902b5574f549dfee Packed ID: wf |
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scatter-valuefrom-wf1.cwl
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![]() Path: v1.0/v1.0/scatter-valuefrom-wf1.cwl Branch/Commit ID: 622134ebc48980676b7e53fe39405c428920c03e |
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PGAP Pipeline
PGAP pipeline for external usage, powered via containers |
![]() Path: wf_common.cwl Branch/Commit ID: 22ffe27d9d4a899def7592d75d5871c1856adbdb |
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get_spike_in_counts.cwl
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![]() Path: CWL/workflow_modules/get_spike_in_counts.cwl Branch/Commit ID: b7709bff6bd6e93a28dfc2fee0655f6aceef0901 |
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scatter-wf1_v1_0.cwl
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![]() Path: testdata/scatter-wf1_v1_0.cwl Branch/Commit ID: 77669d4dd1d1ebd2bdd9810f911608146d9b8e51 |
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Cut-n-Run pipeline paired-end
Experimental pipeline for Cut-n-Run analysis. Uses mapping results from the following experiment types: - `chipseq-pe.cwl` - `trim-chipseq-pe.cwl` - `trim-atacseq-pe.cwl` Note, the upstream analyses should not have duplicates removed |
![]() Path: workflows/trim-chipseq-pe-cut-n-run.cwl Branch/Commit ID: cbefc215d8286447620664fb47076ba5d81aa47f |
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count-lines10-wf.cwl
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![]() Path: tests/count-lines10-wf.cwl Branch/Commit ID: 5f27e234b4ca88ed1280dedf9e3391a01de12912 |