Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	count-lines4-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines4-wf.cwl Branch/Commit ID: e8b3565a008d95859fc44227987a54e6a53a8c29
	mutect2_calling.cwl GATK4.1.2 Mutect2 workflow	https://github.com/NCI-GDC/gatk4_mutect2_cwl.git Path: subworkflows/mutect2_calling.cwl Branch/Commit ID: 0debfe681fc16cfee943d799dcebc7fe4bb82495
	Detect Variants workflow	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: a59a803e1809a8fbfabca6b8962a8ad66dd01f1d
	directory.cwl Inspect provided directory and return filenames. Generate a new directory and return it (including content).	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/directory.cwl Branch/Commit ID: 819c81af5449ec912bbbbead042ad66b8d3fd8d4
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_exome.cwl Branch/Commit ID: a59a803e1809a8fbfabca6b8962a8ad66dd01f1d
	1st-workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/1st-workflow.cwl Branch/Commit ID: fd6e054510e2bb65eed4069a3a88013d7ecbb99c
	1st-workflow.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/1st-workflow.cwl Branch/Commit ID: 875b928ce50a3202f5954843b79ea86683c160fa
	Feature expression merge - combines feature expression from several experiments Feature expression merge - combines feature expression from several experiments ========================================================================= Workflows merges RPKM (by default) gene expression from several experiments based on the values from GeneId, Chrom, TxStart, TxEnd and Strand columns (by default). Reported unique columns are renamed based on the experiments names.	https://github.com/datirium/workflows.git Path: workflows/feature-merge.cwl Branch/Commit ID: d76110e0bfc40c874f82e37cef6451d74df4f908
	mut2.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/mut2.cwl Branch/Commit ID: 3ed10d0ea7ac57550433a89a92bdbe756bdb0e40
	Cell Ranger Build Reference Indices Devel version of Cell Ranger Build Reference Indices pipeline =============================================================	https://github.com/datirium/workflows.git Path: workflows/cellranger-mkref.cwl Branch/Commit ID: 64f7fe4438898218fd83133efa25251078f5b27e