Explore Workflows

This workflow takes in single-end reads, and performs the following steps in order: demux_se.cwl (does not actually demux for single end, but mirrors the paired-end processing protocol)

https://github.com/yeolab/eclip.git

Path: cwl/wf_fastqc.cwl

Branch/Commit ID: master

https://github.com/Christensen-Lab-Dartmouth/PyMethylProcess.git

Path: cwl/workflows/download_pheno.cwl

Branch/Commit ID: master

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/samtools_sort.cwl

Branch/Commit ID: 1.0.5

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/output-arrays-file-wf.cwl

Branch/Commit ID: master

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/count-lines4-wf.cwl

Branch/Commit ID: 639229b1159cf484e70e52da10194561b3fad719

https://github.com/ddbj/human-reseq.git

Path: Workflows/bams2gvcf.woBQSR_female_chrX_wXTR.cwl

Branch/Commit ID: master

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/fp_filter.cwl

Branch/Commit ID: master

https://github.com/Marco-Salvi/cwl-test.git

Path: wf5201/ST520117.cwl

Branch/Commit ID: main

https://github.com/wtsi-hgi/arvados-pipelines.git

Path: cwl/workflows/intersect_intervals.cwl

Branch/Commit ID: master

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: f6b5196