Explore Workflows

https://github.com/ddbj/human-reseq.git

Path: Workflows/bams2gvcf.woBQSR_male_chrXY_wXTR.multisamples.cwl

Branch/Commit ID: master

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: 5e82174

This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow.

https://github.com/icgc-tcga-pancancer/pcawg-minibam.git

Path: preprocess_vcf.cwl

Branch/Commit ID: master

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/bulk_process.cwl

Branch/Commit ID: 102d8cb

https://github.com/Gepiro/rCASC_StreamFlow.git

Path: setting/testTimeSIMLR.cwl

Branch/Commit ID: main

https://github.com/kinow/pipeline-v5.git

Path: workflows/subworkflows/assembly/cgc/predict_proteins_assemblies.cwl

Branch/Commit ID: eosc-life-gos

Single-cell RNA-Seq Analyze Runs filtering, normalization, scaling, integration (optionally) and clustering for a single or aggregated single-cell RNA-Seq datasets.

https://github.com/Barski-lab/sc-seq-analysis.git

Path: workflows/sc-rna-analyze-wf.cwl

Branch/Commit ID: main

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/kb-tss-preprocess-all.cwl

Branch/Commit ID: master

Packed ID: align-texts-wf.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/variant_calling/haplotypecaller.cwl

Branch/Commit ID: master

https://github.com/bioexcel/biobb_wf_cwl_tutorial.git

Path: biobb_wf_cwl_tutorial/examples/BioExcel-CWL-firstWorkflow.cwl

Branch/Commit ID: master