Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph abundance

abundace profiles from annotated files, for protein and/or rna

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/abundance-clca.workflow.cwl

Branch/Commit ID: master
workflow graph optimal-pipeline-xml.cwl

https://github.com/MaastrichtU-IDS/OptimAL.git

Path: workflow/optimal-pipeline-xml.cwl

Branch/Commit ID: master
workflow graph exome alignment and germline variant detection

https://github.com/litd/analysis-workflows.git

Path: definitions/pipelines/germline_exome.cwl

Branch/Commit ID: master
workflow graph EMG assembly for paired end Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: caea457
workflow graph RNASelector as a CWL workflow

https://doi.org/10.1007/s12275-011-1213-z

 https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: c211071
workflow graph Run taxonomic classification, create OTU table and krona visualisation

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/subworkflows/classify-otu-visualise.cwl

Branch/Commit ID: master
workflow graph seq_cache_workflow.cwl

https://github.com/wtsi-hgi/arvados-pipelines.git

Path: cwl/workflows/seq_cache_workflow.cwl

Branch/Commit ID: master
workflow graph Salmon quantification, FASTQ -> H5AD count matrix

https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git

Path: salmon-rnaseq/steps/salmon-quantification.cwl

Branch/Commit ID: 68e0cc1
workflow graph word-mapping-test-files-wf.cwl#align-texts-wf.cwl

https://github.com/kbnlresearch/ochre.git

Path: ochre/cwl/word-mapping-test-files-wf.cwl

Branch/Commit ID: master

Packed ID: align-texts-wf.cwl
workflow graph EMG assembly for paired end Illumina

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-assembly.cwl

Branch/Commit ID: 0cd2d70