Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	01-local-mrna-prot-comparison.cwl	https://github.com/PNNL-CompBio/decomprolute.git Path: localData/01-local-mrna-prot-comparison.cwl Branch/Commit ID: 6351764c74a44fc4fa2042d31c0cedde5a5bdbe9
	workflow_input_sf_expr_array_v1_1.cwl	https://github.com/common-workflow-language/cwl-utils.git Path: testdata/workflow_input_sf_expr_array_v1_1.cwl Branch/Commit ID: 0ab1d42d10f7311bb4032956c4a6f3d2730d9507
	bam to trimmed fastqs and HISAT alignments	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: c711498c04d6b8ddf92ddceb6219f074765f7993
	secret_wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/secret_wf.cwl Branch/Commit ID: d6000d32f6c8fbd26421a2d30d79b28901d58fb0
	Whole genome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_wgs.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	tt_fscr_calls_pass1	https://github.com/ncbi/pgap.git Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: 42df0c0f9a4e5697abadd9cb52440691fafc8f5d
	count-lines13-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines13-wf.cwl Branch/Commit ID: 7c7615c44b80f8e76e659433f8c7875603ae0b25
	exome alignment with qc, no bqsr, no verify_bam_id	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/exome_alignment_mouse.cwl Branch/Commit ID: f9600f9959acdc30259ba7e64de61104c9b01f0b
	gathered exome alignment and somatic variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/gathered_somatic_exome.cwl Branch/Commit ID: a9133c999502acf94b433af8d39897e6c2cdf65f
	heatmap.cwl Generates ATDP heatmap centered on TSS from an array of input BAM files and genelist TSV file. Returns array of heatmap JSON files with the names that have the same basenames as input BAM files, but with .json extension	https://github.com/Barski-lab/workflows.git Path: workflows/heatmap.cwl Branch/Commit ID: 64e85970dbecba89c3380ab285c108d221e76fe6