Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph varscan somatic workflow

https://github.com/ChrisMaherLab/PACT.git

Path: subworkflows/varscan.cwl

Branch/Commit ID: master
workflow graph collapsed_fastq_to_bam.cwl

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/marianas/collapsed_fastq_to_bam.cwl

Branch/Commit ID: master
workflow graph make_final_outputs_workflow.cwl

https://github.com/NCI-GDC/gdc-rnaseq-cwl.git

Path: rnaseq-star-align/subworkflows/rnaseq_processing/make_final_outputs_workflow.cwl

Branch/Commit ID: master
workflow graph Detect Variants workflow for WGS pipeline

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/detect_variants_wgs.cwl

Branch/Commit ID: master
workflow graph manyjobs.cwl

https://github.com/fhembroff/wes-testing.git

Path: manyjobs/manyjobs.cwl

Branch/Commit ID: main
workflow graph topmed-alignment-checker.cwl

https://github.com/DataBiosphere/topmed-workflows.git

Path: aligner/sbg-alignment-cwl/topmed-alignment-checker.cwl

Branch/Commit ID: master
workflow graph map medium and long reads (> 100 bp) against reference genome

https://github.com/common-workflow-library/bio-cwl-tools.git

Path: bwa/BWA-Mem2-single.cwl

Branch/Commit ID: release
workflow graph main-somatic.cwl

https://github.com/farahzkhan/bcbio_test_cwlprov.git

Path: somatic/somatic-workflow/main-somatic.cwl

Branch/Commit ID: master
workflow graph maw_single.cwl

https://github.com/zmahnoor14/MAW.git

Path: cwl/maw_single.cwl

Branch/Commit ID: main
workflow graph rna annotation

RNAs - predict, cluster, identify, annotate

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/rna-annotation.workflow.cwl

Branch/Commit ID: master