Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph mpi_simple_wf.cwl

Simple 2 step workflow to check that workflow steps are independently picking up on the number of processes. First run the parallel get PIDs step (on the input num procs) then run (on a single proc) the line count. This should equal the input.

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/mpi_simple_wf.cwl

Branch/Commit ID: 2dce710246e091f0189fab41b589ee062ee94500
workflow graph optional_src_mandatory_sink.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/optional_src_mandatory_sink.cwl

Branch/Commit ID: 2dce710246e091f0189fab41b589ee062ee94500
workflow graph Single-cell Pseudobulk Differential Expression Analysis Between Datasets

Single-cell Pseudobulk Differential Expression Analysis Between Datasets Identifies differentially expressed genes between groups of cells coerced to pseudobulk datasets.

 https://github.com/datirium/workflows.git

Path: workflows/sc-rna-de-pseudobulk.cwl

Branch/Commit ID: 7030da528559c7106d156284e50ff0ecedab0c4e
workflow graph default-dir5.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/default-dir5.cwl

Branch/Commit ID: 2dce710246e091f0189fab41b589ee062ee94500
workflow graph default-wf5.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/default-wf5.cwl

Branch/Commit ID: 2dce710246e091f0189fab41b589ee062ee94500
workflow graph three_step_color.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/three_step_color.cwl

Branch/Commit ID: 2dce710246e091f0189fab41b589ee062ee94500
workflow graph trick_revsort.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/trick_revsort.cwl

Branch/Commit ID: 2dce710246e091f0189fab41b589ee062ee94500
workflow graph workflow_input_sf_expr_array.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/workflow_input_sf_expr_array.cwl

Branch/Commit ID: 7af75226f084349e401b1114f25bdcdee060e127
workflow graph run-one.cwl

https://github.com/hubmapconsortium/hra-workflows.git

Path: steps/run-one.cwl

Branch/Commit ID: 9de19547a66b5b705c16de616da2dced5c9175f8
workflow graph step-valuefrom2-wf_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/step-valuefrom2-wf_v1_2.cwl

Branch/Commit ID: 7af75226f084349e401b1114f25bdcdee060e127