Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph facets.cwl

https://github.com/mskcc/roslin-cwl.git

Path: modules/pair/facets.cwl

Branch/Commit ID: master
workflow graph l1b_workflow.cwl

https://github.com/nlahaye/sounder-sips-application.git

Path: cwl/l1b_workflow.cwl

Branch/Commit ID: main
workflow graph upload_results_workflow.cwl

https://github.com/nci-gdc/htseq-cwl.git

Path: workflows/subworkflows/upload_results_workflow.cwl

Branch/Commit ID: master
workflow graph qiime2 create phylogenetic tree

Generate a tree for phylogenetic diversity analyses from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/qiime2-step2-deblur.cwl

Branch/Commit ID: qiime2-workflow-paired

Packed ID: qiime2-05-phylogeny.cwl
workflow graph count-lines2-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines2-wf.cwl

Branch/Commit ID: master
workflow graph sc_atac_seq_prep_process_init.cwl

https://github.com/hubmapconsortium/multiome-rna-atac-pipeline.git

Path: sc-atac-seq-pipeline/steps/sc_atac_seq_prep_process_init.cwl

Branch/Commit ID: ec8a7e8
workflow graph BD Rhapsody™ WTA Analysis Pipeline

The BD Rhapsody™ WTA Analysis Pipeline is used to create sequencing libraries from single cell transcriptomes without having to specify a targeted panel. After sequencing, the analysis pipeline takes the FASTQ files, a reference genome file and a transcriptome annotation file for gene alignment. The pipeline generates molecular counts per cell, read counts per cell, metrics, and an alignment file.

 https://github.com/longbow0/cwl.git

Path: v1.8/rhapsody_wta_1.8.cwl

Branch/Commit ID: master

Packed ID: main
workflow graph harmonization_novoalign_multi_readgroup.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/harmonization_novoalign_multi_readgroup.cwl

Branch/Commit ID: master
workflow graph Execute CRISPR

https://github.com/ncbi/pgap.git

Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl

Branch/Commit ID: master
workflow graph kmer_build_tree

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_build_tree.cwl

Branch/Commit ID: test