Explore Workflows
View already parsed workflows here or click here to add your own
Graph | Name | Retrieved From | View |
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Detect DoCM variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: a23f42ef49c10a588fd35a3afaad5de03e253533 |
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steplevel-resreq.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/steplevel-resreq.cwl Branch/Commit ID: cd779a90a4336563dcf13795111f502372c6af83 |
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cluster_blastp_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 7e875f77b615b4f7ebfb23a1da30eb216cc52919 |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: a670f323e77e02d9b77be9a13d73d5276dd3676c |
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default-wf5.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/default-wf5.cwl Branch/Commit ID: f997d13af87216e9b5048c732a511053c7ba714c |
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any-type-compat.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/any-type-compat.cwl Branch/Commit ID: 9a23706ec061c5d2c02ff60238d218aadf0b5db9 |
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scatter-wf1.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-wf1.cwl Branch/Commit ID: 6300a49ec29be956ab451311fe9781522f461aee |
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Raw sequence data to BQSR
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: 735be84cdea041fcc8bd8cbe5728b29ca3586a21 |
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bam to trimmed fastqs and biscuit alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 6b365b79675b2aabfb8d5829bb8df0a6e986b037 |
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Exome QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 735be84cdea041fcc8bd8cbe5728b29ca3586a21 |