Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	final-workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: final-workflow.cwl Branch/Commit ID: a1533848372b4dd8237c45df91fe26b620113e38
	scatter GATK HaplotypeCaller over intervals	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: a9133c999502acf94b433af8d39897e6c2cdf65f
	revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/revsort.cwl Branch/Commit ID: 9a23706ec061c5d2c02ff60238d218aadf0b5db9
	spiel.cwl	https://github.com/gijzelaerr/spiel.git Path: spiel.cwl Branch/Commit ID: c4a8e315ae65176dda4871fabd1c241904ef5232
	workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: flow_dispatch/2working_files/workflow.cwl Branch/Commit ID: a1533848372b4dd8237c45df91fe26b620113e38
	strelka workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: 40097e1ed094c5b42b68f3db2ff2cbe78c182479
	Preprocess fastq Remove and trim low quality reads from fastq files. Return fasta files with reads passed and reads removed.	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/preprocess-fastq.workflow.cwl Branch/Commit ID: 7b1df2ecce5a8727f2c546c5baa45c919edd8a76
	blastp_wnode_naming	https://github.com/ncbi/pgap.git Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: cabb1a9a95244e93294727be8cf5816c38992cb0
	abundance abundace profiles from annotated files, for protein and/or rna	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/abundance.workflow.cwl Branch/Commit ID: 7b1df2ecce5a8727f2c546c5baa45c919edd8a76
	Filter Protein Alignments I	https://github.com/ncbi/pgap.git Path: protein_alignment/wf_align_filter.cwl Branch/Commit ID: cabb1a9a95244e93294727be8cf5816c38992cb0