Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph retrieve metadata from Zenodo community

For a given Zenodo community, retrieve its repository records as Zenodo JSON and (eventually) schema.org JSON-LD and DataCite v4 XML.

https://github.com/stain/ro-index-paper.git

Path: code/data-gathering/workflows/zenodo-records.cwl

Branch/Commit ID: master
workflow graph Downsample and HaplotypeCaller

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/downsample_and_recall.cwl

Branch/Commit ID: master
workflow graph Bisulfite QC tools

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/bisulfite_qc.cwl

Branch/Commit ID: downsample_and_recall
workflow graph EMG pipeline v4.0 (single end version)

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v4-single.cwl

Branch/Commit ID: master
workflow graph sc_atac_seq_prep_process_analyze.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: sc_atac_seq_prep_process_analyze.cwl

Branch/Commit ID: 3da5dd0
workflow graph submit2ebi.workflow.cwl

https://github.com/MG-RAST/ebi-submitter.git

Path: CWL/workflows/submit2ebi.workflow.cwl

Branch/Commit ID: master
workflow graph bulk_analysis.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/bulk_analysis.cwl

Branch/Commit ID: v1.0
workflow graph scatter-valuefrom-inputs-wf1.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/scatter-valuefrom-inputs-wf1.cwl

Branch/Commit ID: master
workflow graph Chunked version of phmmer-v3.2.cwl

https://github.com/mscheremetjew/workflow-is-cwl.git

Path: workflows/phmmer-v3.2-chunked-wf.cwl

Branch/Commit ID: assembly
workflow graph preprocess.cwl

https://github.com/ncbi-hackathons/epigenomics_cwl.git

Path: cwl/tools/preprocess.cwl

Branch/Commit ID: master