Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph basename-fields-test.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/basename-fields-test.cwl

Branch/Commit ID: master
workflow graph strelkaSomaticVariantCaller_v0_1_1.cwl

https://github.com/PMCC-BioinformaticsCore/janis-pipelines.git

Path: janis_pipelines/wgs_somatic/cwl/tools/strelkaSomaticVariantCaller_v0_1_1.cwl

Branch/Commit ID: master
workflow graph gsnap_multilib.cwl

https://github.com/CompEpigen/PipelineOlympics.git

Path: CWL/workflows/GSNAP/gsnap_multilib.cwl

Branch/Commit ID: main
workflow graph mutect parallel workflow

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/mutect.cwl

Branch/Commit ID: downsample_and_recall
workflow graph wf-svcall.cwl

https://github.com/bcbio/bcbio_validation_workflows.git

Path: wes-agha-test/wes_chr21_test-workflow-arvados/wf-svcall.cwl

Branch/Commit ID: master
workflow graph NonSpliced RNAseq workflow

Workflow for NonSpliced RNAseq data alignment with multiple aligners. Steps: - workflow_illumina_quality.cwl: - FastQC (control) - fastp (trimming) - bowtie2 (read mapping) - sam_to_sorted-bam - featurecounts (transcript read counts) - kallisto (transcript [pseudo]counts)

https://git.wur.nl/unlock/cwl.git

Path: cwl/workflows/workflow_RNAseq_NonSpliced.cwl

Branch/Commit ID: master
workflow graph blast-reuse-image.cwl

https://github.com/betisb/InputParser.git

Path: cwl/blast-reuse-image.cwl

Branch/Commit ID: master
workflow graph wf_main.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/yw2cwl_parser/example_sql/main/wf_main.cwl

Branch/Commit ID: master
workflow graph ST520110.cwl

https://github.com/Marco-Salvi/cwl-test.git

Path: wf5201/ST520110.cwl

Branch/Commit ID: main
workflow graph ProteinInferenceWorkflow.cwl

https://github.com/adamscharlotte/CWL-workflow.git

Path: ProteinInferenceWorkflow.cwl

Branch/Commit ID: master