Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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revsort-array.cwl
Reverse the lines in a document, then sort those lines. |
https://github.com/Duke-GCB/calrissian.git
Path: input-data/revsort-array.cwl Branch/Commit ID: master |
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Genome conversion and annotation
Workflow for genome annotation from EMBL format |
https://git.wageningenur.nl/unlock/cwl.git
Path: cwl/workflows/workflow_sapp_microbes.cwl Branch/Commit ID: master |
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oxog_varbam_annotate_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
https://github.com/icgc-tcga-pancancer/oxog-dockstore-tools.git
Path: oxog_varbam_annotate_wf.cwl Branch/Commit ID: 1.0.0 |
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module-6
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https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/module-6.cwl Branch/Commit ID: 2.4.x |
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Spectral_counting_workflow.cwl
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https://github.com/adamscharlotte/CWL-workflow.git
Path: Spectral_counting_workflow.cwl Branch/Commit ID: master |
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delay-calibration.cwl
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https://github.com/lonbar/VLBI-cwl.git
Path: workflows/delay-calibration.cwl Branch/Commit ID: master |
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Unaligned to aligned BAM
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https://github.com/tmooney/cancer-genomics-workflow.git
Path: definitions/subworkflows/align.cwl Branch/Commit ID: downsample_and_recall |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/rna-selector.cwl Branch/Commit ID: 5833078 |
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scatter GATK HaplotypeCaller over intervals
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https://github.com/fgomez02/analysis-workflows.git
Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: No_filters_detect_variants |
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foreign_screening.cwl
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https://github.com/ncbi/pgap.git
Path: vecscreen/foreign_screening.cwl Branch/Commit ID: test |
