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Graph	Name	Retrieved From	View
	Bacterial Annotation, ab initio (first pass) searched against AntiFam	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_ab_initio_antifam.cwl Branch/Commit ID: c64599f5db2437f9323d41cc3d8d9efb20a2667e
	Run genomic CMsearch (Rfam rRNA)	https://github.com/ncbi/pgap.git Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: c64599f5db2437f9323d41cc3d8d9efb20a2667e
	Non-Coding Bacterial Genes	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: c64599f5db2437f9323d41cc3d8d9efb20a2667e
	trim-rnaseq-pe-dutp.cwl Runs RNA-Seq BioWardrobe basic analysis with strand specific pair-end data file.	https://github.com/Barski-lab/workflows.git Path: workflows/trim-rnaseq-pe-dutp.cwl Branch/Commit ID: ca2dbb71d0537b1d93a8bd44719250cf8949b157
	spurious_annot	https://github.com/ncbi/pgap.git Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: c64599f5db2437f9323d41cc3d8d9efb20a2667e
	Execute CRISPR	https://github.com/ncbi/pgap.git Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: c64599f5db2437f9323d41cc3d8d9efb20a2667e
	bacterial_orthology_cond	https://github.com/ncbi/pgap.git Path: bacterial_orthology/wf_bacterial_orthology_conditional.cwl Branch/Commit ID: c64599f5db2437f9323d41cc3d8d9efb20a2667e
	Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_ab_initio_training.cwl Branch/Commit ID: c64599f5db2437f9323d41cc3d8d9efb20a2667e
	Create Genomic Collection for Bacterial Pipeline, ASN.1 input	https://github.com/ncbi/pgap.git Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: c64599f5db2437f9323d41cc3d8d9efb20a2667e
	Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)	https://github.com/ncbi/pgap.git Path: bacterial_annot/wf_orf_hmms.cwl Branch/Commit ID: c64599f5db2437f9323d41cc3d8d9efb20a2667e