Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Subworkflow that runs cnvkit in single sample mode and returns a vcf file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cnvkit_single_sample.cwl Branch/Commit ID: 051074fce4afd9732ef34db9dd43d3a1d8e979d6 |
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io-int-default-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.1.git
Path: tests/io-int-default-wf.cwl Branch/Commit ID: e515226f8ac0f7985cd94dae4a301150adae3050 |
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count-lines5-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/count-lines5-wf.cwl Branch/Commit ID: e62f99dd79d6cb9c157cceb458f74200da84f6e9 |
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varscan somatic workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: 7b4b489474473c3d2d992a838b89632c2b97dc2c |
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bam to trimmed fastqs and biscuit alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: 4bc0a4577d626b65a4b44683e5a1ab2f7d7faf4c |
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blastp_wnode_naming
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 8af4e2aabf43d5e3c7162efae4ad4649df5601e2 |
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checkm_wnode
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https://github.com/ncbi/pgap.git
Path: task_types/tt_checkm_wnode.cwl Branch/Commit ID: 8af4e2aabf43d5e3c7162efae4ad4649df5601e2 |
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kmer_top_n_extract
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_top_n_extract.cwl Branch/Commit ID: e6fd7898b71a89b667d2eb38f412999920be5902 |
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kmer_cache_retrieve
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https://github.com/ncbi/pgap.git
Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 55b6ee46b0c9fb1c9949cd0888b388c6f11b73b1 |
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any-type-compat.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/any-type-compat.cwl Branch/Commit ID: 4700fbee9a5a3271eef8bc9ee595619d0720431b |
