Explore Workflows
View already parsed workflows here or click here to add your own
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AltAnalyze ICGS
AltAnalyze ICGS =============== |
Path: workflows/altanalyze-icgs.cwl Branch/Commit ID: c6bfa0de917efb536dd385624fc7702e6748e61d |
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kmer_cache_retrieve
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Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 4a44218a713aecc488359be275409414ae8c1434 |
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wgs alignment and tumor-only variant detection
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Path: definitions/pipelines/tumor_only_wgs.cwl Branch/Commit ID: 25eab0390f6866ce491b44c89d9e0435d228ab6f |
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Apply filters to VCF file
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Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: f42c889734c8f709ad2fd9090493bcaac8326c98 |
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Apply filters to VCF file
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Path: definitions/subworkflows/germline_filter_vcf.cwl Branch/Commit ID: 7b4b489474473c3d2d992a838b89632c2b97dc2c |
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scatter GATK HaplotypeCaller over intervals
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Path: definitions/subworkflows/gatk_haplotypecaller_iterator.cwl Branch/Commit ID: 7b4b489474473c3d2d992a838b89632c2b97dc2c |
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Apply filters to VCF file
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Path: definitions/subworkflows/filter_vcf_mouse.cwl Branch/Commit ID: f42c889734c8f709ad2fd9090493bcaac8326c98 |
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bam_readcount workflow
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Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 735be84cdea041fcc8bd8cbe5728b29ca3586a21 |
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exome alignment with qc
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Path: definitions/pipelines/alignment_exome.cwl Branch/Commit ID: 8dc462a7d9ba1479f764682af99c69d8574cb3dc |
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count-lines12-wf.cwl
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Path: cwltool/schemas/v1.0/v1.0/count-lines12-wf.cwl Branch/Commit ID: 7c7615c44b80f8e76e659433f8c7875603ae0b25 |
