Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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04-quantification-pe-unstranded.cwl
RNA-seq 04 quantification |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/RNA-seq_pipeline/04-quantification-pe-unstranded.cwl Branch/Commit ID: master |
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cnv_gridss
CNV GRIDSS calling |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/cnv_gridss.cwl Branch/Commit ID: 1.0.5 |
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oxog_varbam_annotate_wf.cwl
This workflow will run OxoG, variantbam, and annotate. Run this as `dockstore --script --debug workflow launch --descriptor cwl --local-entry --entry ./oxog_varbam_annotate_wf.cwl --json oxog_varbam_annotat_wf.input.json ` |
https://github.com/icgc-tcga-pancancer/oxog-dockstore-tools.git
Path: oxog_varbam_annotate_wf.cwl Branch/Commit ID: 1.0.0 |
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word-mapping-dir.cwl#word-mapping-wf.cwl
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https://github.com/KBNLresearch/ochre.git
Path: ochre/cwl/word-mapping-dir.cwl Branch/Commit ID: master Packed ID: word-mapping-wf.cwl |
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Unaligned bam to sorted, markduped bam
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: master |
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echo-wf-default.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/echo-wf-default.cwl Branch/Commit ID: master |
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protein-search.cwl
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https://github.com/agonopol/tara-ocean-analysis.git
Path: protein-search.cwl Branch/Commit ID: master |
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step-valuefrom2-wf.cwl
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/step-valuefrom2-wf.cwl Branch/Commit ID: master |
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tRNA_selection.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 3f85843 |
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preprocessAndCluster.cwl
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https://github.com/Epigenomics-Screw/Screw.git
Path: cwl/preprocessAndCluster.cwl Branch/Commit ID: scatter |
