Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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pack.cwl
create textures and pack them to be a stellaris mod |
https://gitlab.com/unduthegun/stellaris-emblem-lab.git
Path: pack/pack.cwl Branch/Commit ID: master |
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RNA-Seq alignment and transcript/gene abundance workflow
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https://github.com/genome/cancer-genomics-workflow.git
Path: rnaseq/workflow.cwl Branch/Commit ID: toil_compatibility |
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cnv_gridss
CNV GRIDSS calling |
https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git
Path: structuralvariants/cwl/subworkflows/cnv_gridss.cwl Branch/Commit ID: 1.0.5 |
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test-workflow-from-SRA-Run-id.cwl
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https://github.com/hacchy1983/CWL-workflows.git
Path: Workflows/test-workflow-from-SRA-Run-id.cwl Branch/Commit ID: master |
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preprocessing for metagenomic short reads
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https://github.com/EBI-Metagenomics/CWL-assembly.git
Path: src/workflows/metagenome_qc.cwl Branch/Commit ID: master |
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zip_and_index_vcf.cwl
This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output. |
https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git
Path: zip_and_index_vcf.cwl Branch/Commit ID: 1.0.0 |
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WF6101.cwl
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https://github.com/Marco-Salvi/dtc61.git
Path: WF6101.cwl Branch/Commit ID: remove-cycles |
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wf-variantcall.cwl
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https://github.com/bcbio/test_bcbio_cwl.git
Path: somatic/somatic-workflow/wf-variantcall.cwl Branch/Commit ID: master |
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add_multiply_example.cwl
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https://github.com/NLeSC/scriptcwl.git
Path: scriptcwl/examples/add_multiply_example.cwl Branch/Commit ID: master |
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annotator_sub_wf.cwl
This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow! |
https://github.com/ICGC-TCGA-PanCancer/pcawg-snv-indel-annotation.git
Path: annotator_sub_wf.cwl Branch/Commit ID: develop |
