Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph preprocess.cwl

https://github.com/klimstef/testing-for-Haqseq.git

Path: cwl_s/preprocess.cwl

Branch/Commit ID: master
workflow graph post-correct-dir.cwl

https://github.com/KBNLresearch/ochre.git

Path: ochre/cwl/post-correct-dir.cwl

Branch/Commit ID: master
workflow graph call_variants.cwl

https://github.com/mskcc/ACCESS-Pipeline.git

Path: workflows/subworkflows/call_variants.cwl

Branch/Commit ID: master
workflow graph exome alignment and somatic variant detection

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/somatic_exome_nonhuman.cwl

Branch/Commit ID: low-vaf
workflow graph count-lines11-null-step-wf-noET.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines11-null-step-wf-noET.cwl

Branch/Commit ID: master
workflow graph create_snap_and_analyze.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: create_snap_and_analyze.cwl

Branch/Commit ID: 4b2af54
workflow graph CODEX analysis pipeline using Cytokit

https://github.com/hubmapconsortium/codex-pipeline.git

Path: steps/ometiff_second_stitching.cwl

Branch/Commit ID: 16794b6
workflow graph tRNA_selection.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: ca6ca613
workflow graph FASTQ Vector Removal

This workflow clean up vectros from fastq files

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/Contamination/fastq-vector-removal.cwl

Branch/Commit ID: master
workflow graph marianas_collapsing_workflow.cwl

https://github.com/mskcc/Innovation-Pipeline.git

Path: workflows/marianas/marianas_collapsing_workflow.cwl

Branch/Commit ID: master