Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph count-lines3-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/count-lines3-wf.cwl

Branch/Commit ID: main
workflow graph preprocessing for metagenomic short reads

https://github.com/EBI-Metagenomics/CWL-assembly.git

Path: src/workflows/metagenome_qc.cwl

Branch/Commit ID: master
workflow graph ST520107.cwl

https://github.com/Marco-Salvi/cwl-test.git

Path: wf5201/ST520107.cwl

Branch/Commit ID: main
workflow graph metrics-flow.cwl

Run metrics workflow

 https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/metrics-flow.cwl

Branch/Commit ID: master
workflow graph spurious_annot pass2

https://github.com/ncbi/pgap.git

Path: spurious_annot/wf_spurious_annot_pass2.cwl

Branch/Commit ID: master
workflow graph Functional analyis of sequences that match the 16S SSU

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/16S_taxonomic_analysis.cwl

Branch/Commit ID: 0cd2d70
workflow graph Run genomic CMsearch (Rfam rRNA)

https://github.com/ncbi/pgap.git

Path: bacterial_ncrna/wf_gcmsearch.cwl

Branch/Commit ID: dev
workflow graph bam_filtering

BAM filtering

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/bam_filtering.cwl

Branch/Commit ID: 1.1.3
workflow graph basic-text-statistics-pattern-dir.cwl

https://github.com/WhatWorksWhenForWhom/nlppln.git

Path: nlppln/cwl/basic-text-statistics-pattern-dir.cwl

Branch/Commit ID: master
workflow graph bqsr-flow.cwl

Run BQSR pre+post+plot flow

 https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/bqsr-flow.cwl

Branch/Commit ID: master