Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph transcriptome_assemble.cwl

https://github.com/yyoshiaki/DAT2-cwl.git

Path: workflow/transcriptome_assemble/transcriptome_assemble.cwl

Branch/Commit ID: develop
workflow graph preprocess-ont.cwl

https://github.com/fjrmoreews/cwl-workflow-SARS-CoV-2.git

Path: PreProcessing/preprocess-ont.cwl

Branch/Commit ID: preprocessing
workflow graph wgs alignment and germline variant detection

https://github.com/genome/cancer-genomics-workflow.git

Path: germline_wgs_workflow.cwl

Branch/Commit ID: toil_compatibility
workflow graph hisat2_htseq_dexseq.cwl

https://github.com/rawgene/cwl.git

Path: workflows/hisat2_htseq_dexseq.cwl

Branch/Commit ID: master
workflow graph bulk_analysis.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/bulk_analysis.cwl

Branch/Commit ID: bb023f9
workflow graph vecscreen_and_filter_workflow.cwl

https://github.com/sapojnik/av_screen_x.git

Path: progs/vecscreen_and_filter_workflow.cwl

Branch/Commit ID: main
workflow graph macro-cwl

Main stage manager

 https://github.com/fabricebrito/fgb.git

Path: wrapped.cwl

Branch/Commit ID: main

Packed ID: main
workflow graph trimmed_fastq

Quality Control (raw data), Raw Data trimming and Quality Control (pre-processed)

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/trimmed_fastq.cwl

Branch/Commit ID: 1.0.9
workflow graph pcr-bottleneck-coef.cwl

ChIP-seq - map - PCR Bottleneck Coefficients

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/map/pcr-bottleneck-coef.cwl

Branch/Commit ID: master
workflow graph wgs_alignment_fq_wf.cwl

https://github.com/cr-ste-justine/chujs-alignment-workflow.git

Path: workflows/wgs_alignment_fq_wf.cwl

Branch/Commit ID: dev