Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph pindel parallel workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: pindel/workflow.cwl

Branch/Commit ID: toil_compatibility
workflow graph picard_markduplicates

Mark duplicates

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/picard_markduplicates.cwl

Branch/Commit ID: 1.0.6
workflow graph 0966f2689c10438fb382dc0ea2e6a321.cwl

https://renkulab.io/gitlab/team-renku/zurich-bikes-analysis.git

Path: .renku/workflow/0966f2689c10438fb382dc0ea2e6a321.cwl

Branch/Commit ID: master
workflow graph simple_magicblast.cwl

https://github.com/ncbi/cwl-demos.git

Path: blast-pipelines/simple_magicblast.cwl

Branch/Commit ID: master
workflow graph CGC-subwf.cwl

https://github.com/EBI-Metagenomics/pipeline-v5.git

Path: workflows/subworkflows/assembly/CGC-subwf.cwl

Branch/Commit ID: master
workflow graph Replace legacy AML Trio Assay

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/pipelines/aml_trio_cle.cwl

Branch/Commit ID: downsample_and_recall
workflow graph count-lines14-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines14-wf.cwl

Branch/Commit ID: master
workflow graph dedup-2-pass.cwl

run 2-pass dedup: algo LocusCollector + algo Dedup sequentially

 https://github.com/sentieon/sentieon-cwl.git

Path: stage/dedup-2-pass.cwl

Branch/Commit ID: master
workflow graph pindel parallel workflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/pindel.cwl

Branch/Commit ID: low-vaf
workflow graph LSU-from-tablehits.cwl

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: tools/LSU-from-tablehits.cwl

Branch/Commit ID: f6b5196