Explore Workflows

Reverse the lines in a document, then sort those lines.

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/revsort.cwl

Branch/Commit ID: 227f35a5ed50c423afba2353871950aa61d58872

Runs RNA-Seq BioWardrobe basic analysis with pair-end data file.

https://github.com/Barski-lab/workflows.git

Path: workflows/rnaseq-pe.cwl

Branch/Commit ID: master

Validate model of atmosphere

https://github.com/gammasim/workflows.git

Path: workflows/ValidateAtmosphericModel.cwl

Branch/Commit ID: main

XenBase workflow for analysing ChIP-Seq single-end data

https://github.com/Barski-lab/workflows.git

Path: workflows/xenbase-chipseq-se.cwl

Branch/Commit ID: b25b17651171f32005e9d879a9a049382f044baf

PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template)

https://github.com/ncbi/pgap.git

Path: pgap.cwl

Branch/Commit ID: test

Whole Exome Sequence analysis using GATK best practices - Germline SNP & Indel Discovery

https://github.com/Duke-GCB/bespin-cwl.git

Path: packed/exomeseq.cwl

Branch/Commit ID: qiime2-workflow

Packed ID: main

https://github.com/litd/analysis-workflows.git

Path: definitions/pipelines/alignment_exome.cwl

Branch/Commit ID: master

https://github.com/hubmapconsortium/codex-pipeline.git

Path: pipeline.cwl

Branch/Commit ID: no-gpu-for-cwl-vis-only

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v3.cwl

Branch/Commit ID: 9c57dba

https://github.com/epigenomics-screw/screw.git

Path: cwl/preprocess.cwl

Branch/Commit ID: scatter