Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	tRNA_selection.cwl	https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git Path: tools/tRNA_selection.cwl Branch/Commit ID: 43d2fb8
	bowtie-alignment.cwl	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/ChIP-Seq/bowtie-alignment.cwl Branch/Commit ID: master
	rnaseq-alignment-quantification-nosplice This workflow QC, alignment and quantification from TPMCalculator for not spliced genomes	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/RNA-Seq/rnaseq-alignment-quantification_nosplice.cwl Branch/Commit ID: master
	MEME motif This workflow uses MEME suite for motif finding	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/ChIP-Seq/meme-motif.cwl Branch/Commit ID: master
	fastq_contamination_cleanup This workflow detect and remove contamination from a DNA fasta file	https://github.com/ncbi/cwl-ngs-workflows-cbb.git Path: workflows/Contamination/fastq-contamination-cleanup.cwl Branch/Commit ID: master
	atac_encode_sample.cwl	https://github.com/ngs-mstb/micgent.git Path: python/lib/MICGENT/data/cwl/atac_encode_sample.cwl Branch/Commit ID: master
	EMG pipeline v3.0 (single end version)	https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git Path: workflows/emg-pipeline-v3.cwl Branch/Commit ID: master
	pipeline.cwl	https://github.com/hubmapconsortium/azimuth-annotate.git Path: pipeline.cwl Branch/Commit ID: main
	RNASelector as a CWL workflow https://doi.org/10.1007/s12275-011-1213-z	https://github.com/proteinswebteam/ebi-metagenomics-cwl.git Path: workflows/rna-selector.cwl Branch/Commit ID: 5dc7c5c
	indexing_bed	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/indexing_bed.cwl Branch/Commit ID: 1.0.7

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