Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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module-4.cwl
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https://github.com/mskcc/Innovation-Pipeline.git
Path: workflows/module-4.cwl Branch/Commit ID: master |
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FASTQ Vector Removal
This workflow clean up vectros from fastq files |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/File-formats/remove-fastq-reads-from-blast.cwl Branch/Commit ID: master |
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Compute library complexity
This workflow compute library complexity |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/File-formats/bedtools-bam-pbc.cwl Branch/Commit ID: master |
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contaminant_cleanup
This workflow detect and remove contamination from a DNA fasta file |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/Contamination/contaminant-cleanup.cwl Branch/Commit ID: master |
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Create tagAlign file
This workflow creates tagAlign file |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/File-formats/create-tagAlign.cwl Branch/Commit ID: master |
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idr.cwl
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https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/idr.cwl Branch/Commit ID: master |
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tRNA_selection.cwl
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https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git
Path: tools/tRNA_selection.cwl Branch/Commit ID: 43d2fb8 |
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bowtie-alignment.cwl
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https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/bowtie-alignment.cwl Branch/Commit ID: master |
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rnaseq-alignment-quantification-nosplice
This workflow QC, alignment and quantification from TPMCalculator for not spliced genomes |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/RNA-Seq/rnaseq-alignment-quantification_nosplice.cwl Branch/Commit ID: master |
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MEME motif
This workflow uses MEME suite for motif finding |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/meme-motif.cwl Branch/Commit ID: master |
