Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph List ZIP content for zenodo community

For a given Zenodo community, list file content of its downloadable *.zip files

https://github.com/stain/ro-index-paper.git

Path: code/data-gathering/workflows/zenodo-zip-content.cwl

Branch/Commit ID: b43b2bf099406a606f1a873baa3452ec8888c7dd
workflow graph Apply filters to VCF file

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/filter_vcf.cwl

Branch/Commit ID: d297528e53b6c1ecb69b1ab27b8e03323b4463ad
workflow graph trnascan_wnode and gpx_qdump combined

https://github.com/ncbi/pgap.git

Path: bacterial_trna/wf_scan_and_dump.cwl

Branch/Commit ID: 8ea3637b0f11eac1ea5599c41d74e00d85fb778d
workflow graph assm_assm_blastn_wnode

https://github.com/ncbi/pgap.git

Path: task_types/tt_assm_assm_blastn_wnode.cwl

Branch/Commit ID: 2afb5ebafd1353ba063cc74ee9a7eaf347afce5c
workflow graph bacterial_orthology_cond

https://github.com/ncbi/pgap.git

Path: bacterial_orthology/wf_bacterial_orthology_conditional.cwl

Branch/Commit ID: 2afb5ebafd1353ba063cc74ee9a7eaf347afce5c
workflow graph wgs alignment and tumor-only variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/wgs.cwl

Branch/Commit ID: 3ee63d8757c341ca98b3b46ec4782862ad19b710
workflow graph extract_file_with_index.cwl

https://github.com/NCI-GDC/aliquot-maf-cwl.git

Path: vcf-to-aliquot-maf/subworkflows/extract_file_with_index.cwl

Branch/Commit ID: af9e756697f29b082790b65f129a6434fd5c4980
workflow graph workflow-ebisearch.cwl

https://github.com/ebi-jdispatcher/webservice-cwl.git

Path: workflows/workflow-ebisearch.cwl

Branch/Commit ID: 88b9948c4977ca90ab5ceb391b2235043135480d
workflow graph Chipseq alignment with qc and creating homer tag directory

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/chipseq.cwl

Branch/Commit ID: 00df82a529a58d362158110581e1daa28b4d7ecb
workflow graph Whole genome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_wgs.cwl

Branch/Commit ID: 449bc7e45bb02316d040f73838ef18359e770268