Explore Workflows
View already parsed workflows here or click here to add your own
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hello_world_checker.cwl
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Path: hello_world_checker.cwl Branch/Commit ID: 1.03 |
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Water body detection based on NDWI and otsu threshold
Water body detection based on NDWI and otsu threshold |
Path: water-bodies/app-package.cwl Branch/Commit ID: bids23 Packed ID: detect_water_body |
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Transcriptome assembly workflow (single-end version)
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Path: workflows/TranscriptomeAssembly-wf.single-end.cwl Branch/Commit ID: assembly |
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rna amplicon analysis for fastq files
RNAs - qc, preprocess, annotation, index, abundance |
Path: CWL/Workflows/amplicon-fastq.workflow.cwl Branch/Commit ID: master |
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Tumor-Only Detect Variants workflow
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Path: definitions/pipelines/tumor_only_detect_variants.cwl Branch/Commit ID: master |
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no-outputs-wf.cwl
Workflow without outputs. |
Path: v1.0/v1.0/no-outputs-wf.cwl Branch/Commit ID: master |
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qc_generator
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Path: access_qc__packed.cwl Branch/Commit ID: develop Packed ID: qc_generator.cwl |
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post_freebayes.cwl
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Path: genomel/cwl/workflows/variant_calling/post_freebayes.cwl Branch/Commit ID: master |
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Transcripts annotation workflow
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Path: workflows/TranscriptsAnnotation-wf.cwl Branch/Commit ID: assembly |
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TransDecoder 2 step workflow, running TransDecoder.LongOrfs (step 1) followed by TransDecoder.Predict (step2)
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Path: workflows/TransDecoder-v5-wf-2steps.cwl Branch/Commit ID: master |
