Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	tt_hmmsearch_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: e351f650524b532f85820b8e53855010b35046c2
	qiime2 demux sequences Demultiplexing sequences from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/	https://github.com/Duke-GCB/bespin-cwl.git Path: packed/qiime2-step1-import-demux.cwl Branch/Commit ID: 777dbcd05b5d115371dcda6d54ebaf75dae8afb8 Packed ID: qiime2-02-demux.cwl
	tt_hmmsearch_wnode.cwl	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 2a81fcde75ca7665814c8de2210c7bc3121a08a3
	exome alignment and tumor-only variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/tumor_only_exome.cwl Branch/Commit ID: c23dc7f113ca0b0a3127a5d6c696e98d4799460c
	umi molecular alignment workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/molecular_qc.cwl Branch/Commit ID: 60edaf6f57eaaf02cda1a3d8cb9a825aa64a43e2
	hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather	https://github.com/ncbi/pgap.git Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: 933a0b7554e4ae76a86d25c76b408b5dfc8ed1e3
	Prepare user input Prepare user input for NCBI-PGAP pipeline	https://github.com/ncbi/pgap.git Path: prepare_user_input2.cwl Branch/Commit ID: dd53e6d71282b0619ef7123ba2d258b30aef2dd0
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 68b828ac482956a03325623d817780986f34fb31
	blastp_wnode_naming	https://github.com/ncbi/pgap.git Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: dd53e6d71282b0619ef7123ba2d258b30aef2dd0
	protein_extract	https://github.com/ncbi/pgap.git Path: progs/protein_extract.cwl Branch/Commit ID: dd53e6d71282b0619ef7123ba2d258b30aef2dd0