Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	count-lines15-wf.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/count-lines15-wf.cwl Branch/Commit ID: 86c46cb397de029e4c91f02cca40fa2b54d22f37
	scatter-wf4.cwl#main	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/scatter-wf4.cwl Branch/Commit ID: e2ec740fccc81ff7071dcd607c5c158fbc0dfb90 Packed ID: main
	exome alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: ec45fad68ca10fb64d5c58e704991b146dc31d28
	gathered exome alignment and somatic variant detection for cle purpose	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/somatic_exome_cle_gathered.cwl Branch/Commit ID: 3bebaf9b70331de9f4845e2223c55082f5a812fb
	env-wf3.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/env-wf3.cwl Branch/Commit ID: b82ce7ae901a54c7a062fd5eefd8d5ceb5a4d684
	revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/revsort.cwl Branch/Commit ID: 8ef515037de411abd2f84b569ad4d4a4f7a2c7a0
	bgzip and index VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: e59c77629936fad069007ba642cad49fef7ad29f
	heatmap-prepare.cwl Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order.	https://github.com/mr-c/datirium-workflows.git Path: tools/heatmap-prepare.cwl Branch/Commit ID: 12b5d227a83b71aff941f50393df0c2c2002c336
	gather AML trio outputs	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/gathered_cle_aml_trio.cwl Branch/Commit ID: aba52e94b6d7470132d3c092c26d67e29d615300
	Chipseq alignment for mouse with qc and creating homer tag directory	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/chipseq_alignment_mouse.cwl Branch/Commit ID: 8438316338e66823e1c9aca9f675b2bf33f2aa59